BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013F04LP1|AL426555
(846 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1695 1645 0.0
>3x_Contig1695
Length = 14630
Score = 1645 bits (828), Expect = 0.0
Identities = 841/846 (99%), Gaps = 1/846 (0%)
Strand = Plus / Plus
Query: 1 gatcagtgccagtaatttaccagcaacatcgactgcagcttcttcaagcacctcaaagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 gatcagtgccagtaatttaccagcaacatcgactgcagcttcttcaagcacctcaaagtc 749
Query: 61 tggctctacgtcttttggtttgggatctactataaaacctcaatctttcatgtcatgggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tggctctacgtcttttggtttgggatctactataaaacctcaatctttcatgtcatgggt 809
Query: 121 tgctactttgattttattagccttttgaaataaattatcccactactgagtaaaaatagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 tgctactttgattttattagccttttgaaataaattatcccactactgagtaaaaatagc 869
Query: 181 actttttattctcttttactgaagtgccctctcacattttcaatgaattatagacgcagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 actttttattctcttttactgaagtgccctctcacattttcaatgaattatagacgcagt 929
Query: 241 ctcatgcaactccgaacgataaaaccccatcattgtacattataatcaacacagtwaaca 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 930 c-catgcaactccgaacgataaaaccccatcattgtacattataatcaacacagtaaaca 988
Query: 301 gcattttcttcatttcagaaagaatcagaataggattgaagatgactctaccctagcata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 gcattttcttcatttcagaaagaatcagaataggattgaagatgactctaccctagcata 1048
Query: 361 cttcactatttcagttaatgtcttgatccgatcagtcactaaaactttaatctatgtgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1049 cttcactatttcagttaatgtcttgatccgatcagtcactaaaactttaatctatgtgtt 1108
Query: 421 caatacaattaaacagaagtgagggcacaatattatgatctttcacctttwatgtatatc 480
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1109 caatacaattaaacagaagtgagggcacaatattatgatctttcacctttaatgtatatc 1168
Query: 481 aatttttaatgttctcatcattacttataacgacacattttgacagtcatataattatac 540
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1169 aatttttaatgttctcatcattacttataacgacacattttgacagtaatataattatac 1228
Query: 541 cttatacaaatatgtaacatattcttaaaacatacttctaacggaaaggataatcacgtc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1229 cttatacaaatatgtaacatattcttaaaacatacttctaacggaaaggataatcacgtc 1288
Query: 601 attttaagaattttcaacataggtgaataggtctcatatcagtccggtggccttattatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1289 attttaagaattttcaacataggtgaataggtctcatatcagtccggtggccttattatt 1348
Query: 661 atataatcgtcttttaccttccgttacttacagctgtgtgtttgtttgactgaatgtaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1349 atataatcgtcttttaccttccgttacttacagctgtgtgtttgtttgactgaatgtaag 1408
Query: 721 caacattactgcctggttcatcattttttattaacaattctagcaggagtvaaggaaagg 780
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1409 caacattactgcctggttcatcattttttattaacaattctagcaggagtcaaggaaagg 1468
Query: 781 taggaaagcagcctaattccaaaaccaagtgaagcgcttctctatcagttgttgatcttg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1469 taggaaagcagcctaattccaaaaccaagtgaagcgcttctctatcagttgttgatcttg 1528
Query: 841 taggag 846
||||||
Sbjct: 1529 taggag 1534
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7038
Number of Sequences: 1807
Number of extensions: 7038
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 846
length of database: 10,358,551
effective HSP length: 16
effective length of query: 830
effective length of database: 10,329,639
effective search space: 8573600370
effective search space used: 8573600370
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)